The detailed information of tRNA gene sequence


Sequence ID>SRA1000503
Genome IDSRR001042.278773
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 41
End posion on genome 116
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acttatgttt
tRNA gene sequence 
ACGGGTTTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCAACCCGTGCAA
Downstream region at tRNA end position 
aaaatataan
Secondary structure (Cloverleaf model)
>SRA1000503	Trp	CCA
                   t      GCAA aaaatataan
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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