The detailed information of tRNA gene sequence


Sequence ID>SRA1000514
Genome IDSRR001042.302892
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 4
End posion on genome 81
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnnatt
tRNA gene sequence 
GCGCCGGTAGCTTCAACTGGATAGAGCGCCGGATTTCGGCTCCGGAGGTTATGGGTTCGA
CTCCTATCCGGCGCACCA
Downstream region at tRNA end position 
aactataaaa
Secondary structure (Cloverleaf model)
>SRA1000514	Arg	TCG
                   t      ACCA aactataaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     T A T C C     A
    C A A C        A      | | + | |     G
  T         T T C G       A T G G G     C
  G         + | | |                 T T
  G         G A G C
    A T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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