The detailed information of tRNA gene sequence


Sequence ID>SRA1000515
Genome IDSRR001042.304513
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 89
End posion on genome 14
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnngaataat
tRNA gene sequence 
GCCACCTTAGCTCAGTTGGTAGAGCAGTTGCCTTGTAAGCATCAGGTCGTCGGTTCGAGT
CCGACAGGTGGCTCCA
Downstream region at tRNA end position 
tattatgaat
Secondary structure (Cloverleaf model)
>SRA1000515	Thr	TGT
                   t      TCCA tattatgaat
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T G
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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