The detailed information of tRNA gene sequence


Sequence ID>SRA1000521
Genome IDSRR001042.316841
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 95
End posion on genome 20
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaactactgt
tRNA gene sequence 
GGCGAGTTGGCGGAGTAGGTGACGCAGCGGATTGCAAATCCGTGTACAACCGGTTCGATT
CCGGTACTCGCCTCCA
Downstream region at tRNA end position 
gatttacaat
Secondary structure (Cloverleaf model)
>SRA1000521	Cys	GCA
                   t      TCCA gatttacaat
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T G G C C     A
      T G A        G      | | | | |     G
    A       G G C G       A C C G G     C
    G         | | |                 T T
    G       A C G C
      T G          A     GTACA
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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