The detailed information of tRNA gene sequence


Sequence ID>SRA1000524
Genome IDSRR001042.327388
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 3
End posion on genome 80
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GCGCTTGTAGCTCAACTGGATAGAGCGCCTGACTTCGGATCGAGGAGGTTCTGGGTTCGA
CTCCTAGCAGGCGCACCA
Downstream region at tRNA end position 
attattcacc
Secondary structure (Cloverleaf model)
>SRA1000524	Arg	TCG
                   t      ACCA attattcacc
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T C
                    T     G A T C C     A
      C A A        A      | | + | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     GAGGTT
                    C - G
                    C   A
                    T + G
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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