The detailed information of tRNA gene sequence


Sequence ID>SRA1000526
Genome IDSRR001043.3216
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 110
End posion on genome 34
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nnngatagcc
tRNA gene sequence 
CGGGGAGTAGCGCAGCCTGGTAGCGCGCTTGGTTCGGGACCAAGAAGTCGGGAGTTCAAA
TCTCCTCTCCCCGACCA
Downstream region at tRNA end position 
acttttttat
Secondary structure (Cloverleaf model)
>SRA1000526	Pro	CGG
                   c      ACCA acttttttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C C T C     A
      C G A        A      + | | | |     A
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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