The detailed information of tRNA gene sequence


Sequence ID>SRA1000529
Genome IDSRR001043.17824
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 17
End posion on genome 101
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgaacaccg
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGCTCGACTTGAAATCGAGTGTACCGAAAGGTACC
GTGGGTTCGAATCCCACCCTCTCCGttc
Downstream region at tRNA end position 
caagtgttgn
Secondary structure (Cloverleaf model)
>SRA1000529	Ser	TGA
                   g      Gttc caagtgttgn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTACCGAAAGGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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