The detailed information of tRNA gene sequence


Sequence ID>SRA1000530
Genome IDSRR001043.33858
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 12
End posion on genome 87
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
attcaaccac
tRNA gene sequence 
GCCACCCTAGCTCAGTTGGTAGAGCAACGCATTCGTAATGCGTGGGTCGAGGGTTCGAGT
CCCTTGGGTGGCTCCT
Downstream region at tRNA end position 
ctccgatcaa
Secondary structure (Cloverleaf model)
>SRA1000530	Thr	CGT
                   c      TCCT ctccgatcaa
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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