The detailed information of tRNA gene sequence


Sequence ID>SRA1000532
Genome IDSRR001043.42905
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 12
End posion on genome 85
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cctgctcaac
tRNA gene sequence 
GGGGTCATAGCTCAACTGGATAGAGCGCTTGCCTTGCAAGCAAGAGGCTAGGAGTTCGAT
CCTCCTTGACCCCAtga
Downstream region at tRNA end position 
tggtgtcnnn
Secondary structure (Cloverleaf model)
>SRA1000532	Ala	TGC
                   c      Atga tggtgtcnnn
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T          C T
                    T     T C C T C     A
      C A A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCT
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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