The detailed information of tRNA gene sequence


Sequence ID>SRA1000534
Genome IDSRR001043.54647
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 100
End posion on genome 24
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nctaaaactt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCCTCCGTTCAAG
TCGGAGCAGGCCCACCA
Downstream region at tRNA end position 
tacaaatcaa
Secondary structure (Cloverleaf model)
>SRA1000534	Met	CAT
                   t      ACCA tacaaatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G A G G C     A
      T G A        A      | | | | |     A
    T       C T C G       C T C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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