The detailed information of tRNA gene sequence


Sequence ID>W1911752027
Genome IDQWLA01000002
Search identical group
Phylum/ClassDeinococcota
SpeciesCalidithermus roseus NBRC 110900 [QWLA]
Start position on genome 51183
End posion on genome 51107
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaagggttc
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTCAGAGCGGGGGACTCATAATCTCTTGGTCGCAGGTTCAAG
TCCTGCACGGCCCACCA
Downstream region at tRNA end position 
gaaaagcagt
Secondary structure (Cloverleaf model)
>W1911752027	Met	CAT
                   c      ACCA gaaaagcagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTC
                    G + T
                    G - C
                    G + T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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