The detailed information of tRNA gene sequence


Sequence ID>W1911752067
Genome IDQWLA01000088
Search identical group
Phylum/ClassDeinococcota
SpeciesCalidithermus roseus NBRC 110900 [QWLA]
Start position on genome 4728
End posion on genome 4817
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttgccgatt
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTATGGGTGCAAGCCCA
TCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
agcaacgtcc
Secondary structure (Cloverleaf model)
>W1911752067	Ser	TGA
                   t      GCCA agcaacgtcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGGGTGCAAGCCCATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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