The detailed information of tRNA gene sequence


Sequence ID>SRA1000538
Genome IDSRR001043.75241
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 14
End posion on genome 101
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttgggagcaT
tRNA gene sequence 
GCCTCGATGGCGGAACAGGTAGACGCTGCGGACTTAAAATCCGTTGACCGTTGAGGTCGT
GCCGGTTCGATTCCGGCTCGAGGCAGCt
Downstream region at tRNA end position 
cannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000538	Leu	TAA
                   T      AGCt cannnnnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     C G G C C     A
      C A A        G      | | | | |     G
    A       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGACCGTTGAGGTCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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