The detailed information of tRNA gene sequence


Sequence ID>SRA1000540
Genome IDSRR001043.83790
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 101
End posion on genome 30
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
nngctaagtt
tRNA gene sequence 
GCGGGTGTAGTTCAGTGGTAGAACGCTACCTTCCCAAGGTCGATGTCGTGGGTTCGAGTC
CCATCACCCGCTtgg
Downstream region at tRNA end position 
tcgtgcagga
Secondary structure (Cloverleaf model)
>SRA1000540	Gly	CCC
                   t      Ttgg tcgtgcagga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
        G A        A      + | | | |     G
      T     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGTC
                    C - G
                    T   C
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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