The detailed information of tRNA gene sequence


Sequence ID>SRA1000541
Genome IDSRR001043.86209
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 7
End posion on genome 80
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
nnnttcgcgT
tRNA gene sequence
TCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGCAGGTTCGAATC
CTGCCTGGGGAGTtt
Downstream region at tRNA end position
ttgtcttttt
Secondary structure (Cloverleaf model)
>SRA1000541	Asn	GTT
                   T      GTtt ttgtcttttt
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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