The detailed information of tRNA gene sequence


Sequence ID>SRA1000542
Genome IDSRR001043.104753
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 42
End posion on genome 115
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
taatgaaatg
tRNA gene sequence 
GCGAGCGTAGCCAAGTGGTTAAGGCAGTGGATTGTGGTTCCACCATTCGGGGGTTCAAGT
CCCCTCGTTCGCCCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000542	His	GTG
                   g      CCnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C          T G
                    T     T C C C C     A
      T G A        A      + | | | |     A
    G       A C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     CATTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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