The detailed information of tRNA gene sequence


Sequence ID>SRA1000545
Genome IDSRR001043.132738
Search identical group
Phylum/ClassStromatolites, microbial fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000135)
Species
Start position on genome 75
End posion on genome 3
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tccacaggat
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGGGGGTTCGAGT
CCTCCAGGGCGCTtcn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000545	Trp	CCA
                   t      Ttcn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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