The detailed information of tRNA gene sequence


Sequence ID>SRA1000546
Genome IDSRR001044.2313
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 16
End posion on genome 103
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
aaatcttatt
tRNA gene sequence 
GTTCCCGTGGCTTAATGGAGGAGCACCGGTCTACGAAACCGGGTCTCGAAAGGGACGTAT
GTAGGTTCGAGTCCTACCGGGAACGCTA
Downstream region at tRNA end position 
gtttgtcctc
Secondary structure (Cloverleaf model)
>SRA1000546	Arg	ACG
                   t      GCTA gtttgtcctc
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A T C C     A
        A A        G      | | | | |     G
      T     T T C G       G T A G G     C
      G     + | | |                 T T
      G     G A G C
        A G        A     GTCTCGAAAGGGACGTAT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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