The detailed information of tRNA gene sequence


Sequence ID>SRA1000547
Genome IDSRR001044.12716
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 2
End posion on genome 78
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnntT
tRNA gene sequence 
GGAGCCTTAGCTCAATTGGGAGAGCGCGGCGTTTGCAACGCAGAGGTTGCGGGTTCGATC
CCCGCAGGCTCCACCC
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000547	Ala	TGC
                   T      ACCC nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     C G C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    C - G
                    G   A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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