The detailed information of tRNA gene sequence


Sequence ID>SRA1000548
Genome IDSRR001044.14826
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 19
End posion on genome 93
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gtaactttat
tRNA gene sequence 
GGCCCATTAGCTCAATGGTTAGAGCATCCGACTTATATTCGGCAGNTAAAGGTTCGATTC
CTTTATGGGNTACCA
Downstream region at tRNA end position 
taanaattag
Secondary structure (Cloverleaf model)
>SRA1000548	Ile	TAT
                   t      ACCA taanaattag
                     G + T
                     G   N
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T T T C C     A
      T A A        A      | | | | |     G
    G       C T C G       A A A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGNT
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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