The detailed information of tRNA gene sequence


Sequence ID>SRA1000550
Genome IDSRR001044.32205
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 5
End posion on genome 88
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnnnagtc
tRNA gene sequence 
GCCGGGGTGGTGAAATGGCATACACAGGGGCCTTAAGAGCCCCCGTCAGCAATGACATAA
GGGTTCGAGTCCCTTTCCCGGCACac
Downstream region at tRNA end position 
ttgacttggg
Secondary structure (Cloverleaf model)
>SRA1000550	Leu	TAA
                   c      ACac ttgacttggg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     T T C C C     A
      T A A        G      | | | | |     G
    G       A G T G       A A G G G     C
    G         | | |                 T T
    C       A C A C
      A T          A     CGTCAGCAATGACAT
                    G - C
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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