The detailed information of tRNA gene sequence


Sequence ID>SRA1000552
Genome IDSRR001044.37241
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 111
End posion on genome 39
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGGAGTATCTCAGCGGCTAGAGACATGGTTTTCTCAACCAACGGTCGTAGGTTCAAAT
CCTACCTCCCCTAttt
Downstream region at tRNA end position 
caccacttct
Secondary structure (Cloverleaf model)
>SRA1000552	Arg	TCT
                   n      Attt caccacttct
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      C G A        A      | | | | |     A
    G       C T C T       G T A G G     C
    G       | | | |                 T T
    C       G A G A
      T A          C     CGGTC
                    A   A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       C
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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