The detailed information of tRNA gene sequence


Sequence ID>SRA1000553
Genome IDSRR001044.38826
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 109
End posion on genome 33
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ncctttttat
tRNA gene sequence 
CAGGGTGTAACTCAATTTGGTAGAGTTCTTGCCTTGGAAGCAAGAAGGTGTAGGTTCAAA
TCCTACTGCCCTGACCA
Downstream region at tRNA end position 
aattttatac
Secondary structure (Cloverleaf model)
>SRA1000553	Pro	TGG
                   t      ACCA aattttatac
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T          T A
                    T     C A T C C     A
      T A A        A      | | | | |     A
    T       C T C A       G T A G G     C
    T       | | | |                 T T
    G       G A G T
      G T A        T     AAGGT
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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