The detailed information of tRNA gene sequence


Sequence ID>SRA1000559
Genome IDSRR001044.49701
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 22
End posion on genome 98
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggcgggattt
tRNA gene sequence 
GCTGATGTAGCTCAGTGGACAAGAGCGCCTCGGTCCTAACGAGAGGGTCGCTGGTTCGAG
TCCAGCCATCAGCACCA
Downstream region at tRNA end position 
aggnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000559	Arg	CCT
                   t      ACCA aggnnnnnnn
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    A       G A G C
      C A A        G     GGGTC
                    C   A
                    C - G
                    T - A
                    C - G
                    G - C
                  G       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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