The detailed information of tRNA gene sequence


Sequence ID>SRA1000560
Genome IDSRR001044.50450
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 106
End posion on genome 31
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
acaaaattct
tRNA gene sequence 
GGGCCGTTAGCTCATTCGGTAGAGCGCACCCCTCGCATGGGTGAGGTGACCGGTTCGATT
CCGGTACGGTCCACCA
Downstream region at tRNA end position 
atatcaaact
Secondary structure (Cloverleaf model)
>SRA1000560	Ala	CGC
                   t      ACCA atatcaaact
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T G G C C     A
      T T A        A      | | | | |     G
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTG
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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