The detailed information of tRNA gene sequence


Sequence ID>SRA1000562
Genome IDSRR001044.52977
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 55
End posion on genome 129
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttttaaat
tRNA gene sequence 
CGCGCGGTGGAGCAGCCAGGTAGCTCGCTGGGTTCATACCCCGGAGGTCAAGGGTTCAAA
TCCCTTCCGCGCTACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000562	Met	CAT
                   t      ACnn nnnnnnnnnn
                     C   T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      | | | | |     A
    C       C G A G       A A G G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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