The detailed information of tRNA gene sequence


Sequence ID>SRA1000564
Genome IDSRR001044.57937
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 101
End posion on genome 15
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnctttc
tRNA gene sequence 
GGACAGGTAGGCAAGTGGTGAAGCCGTCAGACTGTAAATCTGATCCCCTAAAAAGGCGCG
CTGGTTCAAATCCAGCCCTGTCCACCG
Downstream region at tRNA end position 
tggagatgat
Secondary structure (Cloverleaf model)
>SRA1000564	Tyr	GTA
                   c      ACCG tggagatgat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       A C G G       G C T G G     C
    G         | | |                 T T
    T       A G C C
      G A          G     TCCCCTAAAAAGGCGC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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