The detailed information of tRNA gene sequence


Sequence ID>SRA1000566
Genome IDSRR001044.71389
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 78
End posion on genome 3
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagggtacat
tRNA gene sequence 
GCTTATATAGCTCATTTGGTAGAGCTATCGCGTGATAAGCGATGGGTAGCTGGTTCAAGT
CCAGCTATAAGCGCCA
Downstream region at tRNA end position 
gtnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000566	Ile	GAT
                   t      GCCA gtnnnnnnnn
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T
                     T - A
                     A - T          T G
                    T     C G A C C     A
      T T A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     GGGTA
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  G       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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