The detailed information of tRNA gene sequence


Sequence ID>SRA1000572
Genome IDSRR001044.100120
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 21
End posion on genome 105
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
acctttttat
tRNA gene sequence 
GGGACAGTGGTGAAATTGGTAAACACAGCAGATTCCTAATCTGCCGCCTTCTCGGTTTGT
GGGTTCCAATCCCACCTGTAGTCCTt
Downstream region at tRNA end position 
ccnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000572	Arg	CCT
                   t      CCTt ccnnnnnnnn
                     G + T
                     G   G
                     G   A
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T A A        G      | | | | |     C
    T       A G T G       G T G G G     C
    G         | | |                 T T
    G       A C A C
      T A A        A     CGCCTTCTCGGTTT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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