The detailed information of tRNA gene sequence


Sequence ID>SRA1000574
Genome IDSRR001044.105764
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 27
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccagaaaact
tRNA gene sequence 
AGCGGGGGAGTGGAACGGATGACCATACGACTCTCATAAGGTCGTGATAGCAGGTTCGAC
TCCTGCCCCCGTTTCCA
Downstream region at tRNA end position 
atattcggca
Secondary structure (Cloverleaf model)
>SRA1000574	Met	CAT
                   t      TCCA atattcggca
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    G     C G T C C     A
      C A A        A      | | | | |     G
    G       G G T G       G C A G G     C
    G       | | | +                 T T
    A       C C A T
      T G A        A     TGATA
                    C - G
                    G - C
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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