The detailed information of tRNA gene sequence


Sequence ID>SRA1000579
Genome IDSRR001044.126528
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 47
End posion on genome 118
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tataattatt
tRNA gene sequence 
GCCGACATAGCTCAATGGCGGAGCAACGGTTTTGTAAACCGTAGGTTGGGGGTTCAAGTC
CCTCTGTCGGCCnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000579	Thr	TGT
                   t      Cnnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T G
                    T     C T C C C     A
        A A        A      | + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        C G        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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