The detailed information of tRNA gene sequence


Sequence ID>SRA1000580
Genome IDSRR001044.128093
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 103
End posion on genome 28
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nngaaaacaa
tRNA gene sequence 
GCCCACGTAGCCCAATGGCAGAGGCAAGAGACTCAAAATCTCTCAAGTGTCGGTTCGACT
CCGACCGTGGGTACCA
Downstream region at tRNA end position 
tgccgaggta
Secondary structure (Cloverleaf model)
>SRA1000580	Leu	CAA
                   a      ACCA tgccgaggta
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T C
                    T     C A G C C     A
      T A A        A      | | | | |     G
    G       C C C G       G T C G G     C
    G         | | |                 T T
    C       A G G C
      A G          A     CAAGT
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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