The detailed information of tRNA gene sequence


Sequence ID>SRA1000589
Genome IDSRR001044.147115
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 119
End posion on genome 45
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGGGGTATAGCGAAGTGGGAACGCGCTTGCTTTGGGAGCAAGAGATCGGTAGTTCGAGTC
TACCTACCCCGACCA
Downstream region at tRNA end position 
agttctctta
Secondary structure (Cloverleaf model)
>SRA1000589	Pro	TGG
                   n      ACCA agttctctta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C C A T C     A
        G A        A      | | | | |     G
      T     A G C G       G G T A G     C
      G       | | |                 T T
      G     A C G C
        G A        G     AGATC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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