The detailed information of tRNA gene sequence


Sequence ID>SRA1000594
Genome IDSRR001044.171189
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 47
End posion on genome 120
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aattctatat
tRNA gene sequence 
GCCTCAGTAGCTTCAGCGGTTAGAGCACCGGTTTTGTAAACCGGGGGTCGGGGGTTCGAA
TCCCTCCTGAGGCTtat
Downstream region at tRNA end position 
tcnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000594	Thr	TGT
                   t      Ttat tcnnnnnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      G A C        A      | + | | |     G
    C       T T C G       G G G G G     C
    G       + | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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