The detailed information of tRNA gene sequence


Sequence ID>SRA1000603
Genome IDSRR001044.195364
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 5
End posion on genome 79
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnntaaa
tRNA gene sequence 
GCCCCTGTAGTTTAACGGATAAAACAAGAGCCTTCTAAGCTCTAAATCAAGGTTCGATTC
CTTGCGGGGGTGCCT
Downstream region at tRNA end position 
ggaacggtgg
Secondary structure (Cloverleaf model)
>SRA1000603	Arg	TCT
                   a      GCCT ggaacggtgg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     G T T C C     A
      C A A        A      | | | | |     G
    G       T T T G       C A A G G     C
    G       | | | |                 T T
    A       A A A C
      T A          A     AAAT
                    A - T
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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