The detailed information of tRNA gene sequence


Sequence ID>SRA1000607
Genome IDSRR001044.213434
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 5
End posion on genome 81
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnccct
tRNA gene sequence 
GCCGTCGAAGCTCTACTTGGAGGAGCATCCGCCTTGTAAGCGGGAGGATGAGAGTTCGAA
TCTCTCCGATGGCTTCA
Downstream region at tRNA end position 
gtccctcagt
Secondary structure (Cloverleaf model)
>SRA1000607	Thr	TGT
                   t      TTCA gtccctcagt
                     G - C
                     C - G
                     C - G
                     G + T
                     T - A
                     C - G
                     G - C          T A
                    A     C T C T C     A
      C A T        A      | | | | |     G
    T       C T C G       G A G A G     C
    T       | | | |                 T T
    G       G A G C
      G A G        A     AGGAT
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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