The detailed information of tRNA gene sequence


Sequence ID>SRA1000611
Genome IDSRR001044.226418
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 98
End posion on genome 22
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
nnnngccagt
tRNA gene sequence 
GCGGCCTTAGTTCAGTAGGATAGAACATATCCCTGCGAAGGATAAGGTCACAGGTTCGAT
TCCTGTAGGTCGCACCA
Downstream region at tRNA end position 
tttattggac
Secondary structure (Cloverleaf model)
>SRA1000611	Arg	GCG
                   t      ACCA tttattggac
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A          T T
                    T     T G T C C     A
      T G A        A      | | | | |     G
    A       C T T G       A C A G G     C
    G       | | | |                 T T
    G       G A A C
      A T A        A     AGGTC
                    T - A
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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