The detailed information of tRNA gene sequence


Sequence ID>SRA1000614
Genome IDSRR001044.232580
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 115
End posion on genome 41
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
nnnnnnnntT
tRNA gene sequence 
GGGCCGGTAACTCATTGGTTAGAGTGTCAATCTTATAAATTGAAAGTAGTGGGTTCAATT
CCCACCCGGCCTATtc
Downstream region at tRNA end position 
tctattgtga
Secondary structure (Cloverleaf model)
>SRA1000614	Ile	TAT
                   T      ATtc tctattgtga
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C A C C C     A
      T T A        A      | | | | |     A
    G       C T C A       G T G G G     C
    G       | | | |                 T T
    T       G A G T
      T A          G     AAGTA
                    T - A
                    C - G
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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