The detailed information of tRNA gene sequence


Sequence ID>SRA1000616
Genome IDSRR001044.247755
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 4
End posion on genome 79
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnttt
tRNA gene sequence 
GGGACCGTAGCTCAACGGTGAGAGCAGGGGACTCATAATCCCTTGGTTGTAGGTTCGAAT
CCTACCGGTCCCACTA
Downstream region at tRNA end position 
gttttatgtt
Secondary structure (Cloverleaf model)
>SRA1000616	Met	CAT
                   t      ACTA gttttatgtt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C A T C C     A
      C A A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      G A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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