The detailed information of tRNA gene sequence


Sequence ID>SRA1000617
Genome IDSRR001044.247771
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 34
End posion on genome 109
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaatgtcaa
tRNA gene sequence 
GCACACGTACCCAAGTGGCTAAGGGAGCGGTTTGCAAAACCGTTATTCGCCGGTTCGAAT
CCGGCCGTGTGCTCCA
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000617	Cys	GCA
                   a      TCCA gnnnnnnnnn
                     G - C
                     C - G
                     A - T
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | | | | |     G
    G       A C C C       G C C G G     C
    G         | | |                 T T
    C       A G G G
      T A          A     TATTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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