The detailed information of tRNA gene sequence


Sequence ID>SRA1000623
Genome IDSRR001044.263516
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 107
End posion on genome 34
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCTCATAGCTCAGTGGTTAGAGCCGCCGGCTCATAACCGGTTGGTCCCTGGTTCAAAT
CCAGGTGAGCCCACac
Downstream region at tRNA end position 
tatttggaga
Secondary structure (Cloverleaf model)
>SRA1000623	Met	CAT
                   n      ACac tatttggaga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     G G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       C C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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