The detailed information of tRNA gene sequence


Sequence ID>SRA1000625
Genome IDSRR001044.276837
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 92
End posion on genome 18
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agcgatacat
tRNA gene sequence 
GGAACATTGGTGAACCGGCTATCACACCTGCCTGTCTAGTAGGAGTAGGGAGTTCGACCC
TCCCATGTTCCGCCA
Downstream region at tRNA end position 
ctcttaagta
Secondary structure (Cloverleaf model)
>SRA1000625	Asp	GTC
                   t      GCCA ctcttaagta
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     A - T
                     T - A          C C
                    T     C C C T C     A
      C C A        G      | | | | |     G
    G       A G T G       G G G A G     C
    G       | | | |                 T T
    C       T C A C
      T A          A     AGTA
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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