The detailed information of tRNA gene sequence


Sequence ID>SRA1000627
Genome IDSRR001044.278795
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 25
End posion on genome 102
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgcgtttaT
tRNA gene sequence 
GGCAGCGTAGCTCAGTTGGTTAGAGCACAGGACTCATAAGCCTGGGGTCACTGGTTCAAA
TCCAGTCGCTGCTAACC
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000627	Met	CAT
                   T      AACC nnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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