The detailed information of tRNA gene sequence


Sequence ID>SRA1000628
Genome IDSRR001044.279638
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 84
End posion on genome 11
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cggtattatt
tRNA gene sequence 
GGATCCGTAGCTCAATTGGTAGAGCTCCTGGCTTTTAACCAGAGTGATGTGGGTTCGACT
CCTACCGGGTCCACtg
Downstream region at tRNA end position 
gaagatttnn
Secondary structure (Cloverleaf model)
>SRA1000628	Lys	TTT
                   t      ACtg gaagatttnn
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     C - G
                     G - C          T C
                    T     C A T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     GTGAT
                    C   A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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