The detailed information of tRNA gene sequence


Sequence ID>SRA1000632
Genome IDSRR001044.304676
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 24
End posion on genome 98
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
caagagataa
tRNA gene sequence 
CGCCTAGTAGTTCAGTGGTAGAACAACGTTCTTATACAGCGTGTGTCGTGAGTTCGATTC
TCACCTAGGCTACCA
Downstream region at tRNA end position 
aaacaaatnt
Secondary structure (Cloverleaf model)
>SRA1000632	Ile	TAT
                   a      ACCA aaacaaatnt
                     C   T
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C          T T
                    T     C A C T C     A
        G A        A      | | | | |     G
      T     C T T G       G T G A G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     GTGTC
                    A - T
                    C - G
                    G - C
                    T + G
                    T - A
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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