The detailed information of tRNA gene sequence


Sequence ID>SRA1000633
Genome IDSRR001044.307135
Search identical group
Phylum/ClassStromatolites, viral fraction from Pozas Azules microbiolite in Cuatro Cienagas, Mexico (SRP000136)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacaaggaac
tRNA gene sequence 
GGCGAAGTAGCTCAACTGGTTAGAGCGTACCCCTCATAAGGGTAAGGTCGGTGGTTCGAG
TCCACCCTTCGCTACTA
Downstream region at tRNA end position 
ggagaagtat
Secondary structure (Cloverleaf model)
>SRA1000633	Met	CAT
                   c      ACTA ggagaagtat
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C C A C C     A
      C A A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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