The detailed information of tRNA gene sequence


Sequence ID>SRA1000651
Genome IDSRR001045.263986
Search identical group
Phylum/ClassStromatolites, viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000137)
Species
Start position on genome 42
End posion on genome 112
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcaggcccac
tRNA gene sequence 
GACAACTTGGCCGAGTGGATTGGTGCCTGGCTGCAAACCAGGAGACCCCGGTTCGAATCC
GGGAGTTGTCCnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000651	Cys	GCA
                   c      Cnnn nnnnnnnnnn
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T A
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     G C C G       C C C G G     C
      G     + | | +                 T T
      G     T G G T
        A T        G     AGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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