The detailed information of tRNA gene sequence


Sequence ID>SRA1000654
Genome IDSRR001045.347652
Search identical group
Phylum/ClassStromatolites, viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico (SRP000137)
Species
Start position on genome 93
End posion on genome 16
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actcctatac
tRNA gene sequence 
GGTTCATTGGTGTAGCGTGGTTAACACATCTCCCTGTCACGGAGAAGATCACGGGTTCAA
ATCCCGTATGGGCCGCTA
Downstream region at tRNA end position 
agcaacaata
Secondary structure (Cloverleaf model)
>SRA1000654	Asp	GTC
                   c      GCTA agcaacaata
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     A - T
                     T - A          T A
                    T     T G C C C     A
    G C G A        G      | | | | |     A
  T         T G T G       A C G G G     C
  G         | | | |                 T T
  G         A C A C
    T T A          A     AGATC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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