The detailed information of tRNA gene sequence


Sequence ID>SRA1000657
Genome IDSRR001046.7204
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 104
End posion on genome 28
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnnnng
tRNA gene sequence 
CGGGCTGTGGCGCAGCTTGGTAGCGCACTTGACTGGGGGTCAAGGGGTCGCAGGTTCAAA
TCCTGTCAGCCCGACCA
Downstream region at tRNA end position 
cgatttccct
Secondary structure (Cloverleaf model)
>SRA1000657	Pro	GGG
                   g      ACCA cgatttccct
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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