The detailed information of tRNA gene sequence


Sequence ID>SRA1000658
Genome IDSRR001046.8602
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 25
End posion on genome 99
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gggtattcat
tRNA gene sequence 
GGGCGATTAGCTCAGTGGTAGAGCACTTCGTTGACATCGAAGGGGTCACTAGTTCGAACC
TAGTATCGCCCACCA
Downstream region at tRNA end position 
tgaattcnnn
Secondary structure (Cloverleaf model)
>SRA1000658	Val	GAC
                   t      ACCA tgaattcnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     T G A T C     A
        G A        A      | | | | |     G
      T     C T C G       A C T A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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